Regulatory network between TFs in “Neutrophils” under the “Max correlated set” in Table 6.

A visualized global gene regulatory network on the first dataset.

Jilong Li (664972)
Jie Hou (130874)
Lin Sun (105539)
Jordan Maximillian Wilkins (728446)
Yuan Lu (249915)
Chad E. Niederhuth (728447)
Benjamin Ryan Merideth (728448)
Thomas P. Mawhinney (500517)
Valeri V. Mossine (500515)
C. Michael Greenlief (664973)
John C. Walker (728449)
William R. Folk (527168)
Mark Hannink (46139)
Dennis B. Lubahn (527167)
James A. Birchler (257054)
Jianlin Cheng (45046)

April 2015

The network includes all the gene regulatory relationships between and within top 10 gene regulat...

Data Set 4: Transcription factors from the network based on statistically validated interactions likely dysfunctional due to SNPs provoking stop-codons gain or loss.

Alvaro Chiner-Oms (3751681)

February 2017

Transcription factors from the network based on statistically validated interactions likely dysfunct...

The transcriptional regulatory network for E. coli derived from the RegulonDB database.

Jeffrey D. Allen (189037)
Yang Xie (46489)
Min Chen (147733)
Luc Girard (67129)
Guanghua Xiao (46490)

January 2012

Each red dot is a gene, and a blue line between genes indicates a connection.</p

Regulatory network between TFs in “Neutrophils” under the “Clinically correlated set” in Table 6.

Y-h. Taguchi (3270852)
Shohei Komaki (3326091)
Yoichi Sutoh (513815)
Hideki Ohmomo (610855)
Yayoi Otsuka-Yamasaki (11833548)
Atsushi Shimizu (1862)

August 2023

Upper: Regnetwork web, lower: TTRUST2. Blue genes in Regnetwork web and yellow genes in TTRUST2 are ...

Regulatory network between TFs in “Neutrophils” under the “Clinically correlated set” in Table 4.

Y-h. Taguchi (3270852)
Shohei Komaki (3326091)
Yoichi Sutoh (513815)
Hideki Ohmomo (610855)
Yayoi Otsuka-Yamasaki (11833548)
Atsushi Shimizu (1862)

August 2023

Upper: Regnetwork web, lower: TTRUST2. Blue genes in Regnetwork web and yellow genes in TTRUST2 are ...

Regulatory network between TFs in “Neutrophils” under the “Max correlated set” in Table 4.

Y-h. Taguchi (3270852)
Shohei Komaki (3326091)
Yoichi Sutoh (513815)
Hideki Ohmomo (610855)
Yayoi Otsuka-Yamasaki (11833548)
Atsushi Shimizu (1862)

August 2023

Upper: Regnetwork web, lower: TTRUST2. Blue genes in Regnetwork web and yellow genes in TTRUST2 are ...

Regulatory network between TFs in “Monocytes” under the “Max correlated set” in Table 6.

Y-h. Taguchi (3270852)
Shohei Komaki (3326091)
Yoichi Sutoh (513815)
Hideki Ohmomo (610855)
Yayoi Otsuka-Yamasaki (11833548)
Atsushi Shimizu (1862)

August 2023

Upper: Regnetworkweb, lower: TTRUST2. Blue genes in Regnetworkweb and yellow genes in TTRUST2 are TF...

Regulatory network between TFs in “Monocytes” under the “Max correlated set” in Table 4.

Y-h. Taguchi (3270852)
Shohei Komaki (3326091)
Yoichi Sutoh (513815)
Hideki Ohmomo (610855)
Yayoi Otsuka-Yamasaki (11833548)
Atsushi Shimizu (1862)

August 2023

Upper: Regnetworkweb, lower: TTRUST2. Blue genes in Regnetworkweb and yellow genes in TTRUST2 are TF...

Regulatory network between TFs in “CD4 T cells” under the “Clinically correlated set” in Table 6.

Y-h. Taguchi (3270852)
Shohei Komaki (3326091)
Yoichi Sutoh (513815)
Hideki Ohmomo (610855)
Yayoi Otsuka-Yamasaki (11833548)
Atsushi Shimizu (1862)

August 2023

Upper: Regnetwork web, lower: TTRUST2. Blue genes in Regnetwork web and yellow genes in TTRUST2 are ...

Regulatory network between TFs in the “CD4 T cells category” under the “Max correlated set” in Table 6.

Y-h. Taguchi (3270852)
Shohei Komaki (3326091)
Yoichi Sutoh (513815)
Hideki Ohmomo (610855)
Yayoi Otsuka-Yamasaki (11833548)
Atsushi Shimizu (1862)

August 2023

Upper: Regnetwork web, lower: TTRUST2. Blue genes in Regnetwork web and yellow genes in TTRUST2 are ...

Regulatory network between TFs in the “CD4 T cells category” under the “Max correlated set” in Table 4.

Y-h. Taguchi (3270852)
Shohei Komaki (3326091)
Yoichi Sutoh (513815)
Hideki Ohmomo (610855)
Yayoi Otsuka-Yamasaki (11833548)
Atsushi Shimizu (1862)

August 2023

Upper: Regnetwork web, lower: TTRUST2. Blue genes in Regnetwork web and yellow genes in TTRUST2 are ...

Regulatory network between TFs in “CD4 T cells” under the “Clinically correlated set” in Table 4.

Y-h. Taguchi (3270852)
Shohei Komaki (3326091)
Yoichi Sutoh (513815)
Hideki Ohmomo (610855)
Yayoi Otsuka-Yamasaki (11833548)
Atsushi Shimizu (1862)

August 2023

Upper: Regnetworkweb, lower: TTRUST2. Blue genes in Regnetwork web and yellow genes in TTRUST2 are T...

The regulatory relationships between the top 5 TFs and their target genes.

Hongyu Diao (291310)
Xinxing Li (291312)
Sheng Hu (291314)
Yunhui Liu (133710)

February 2013

The red nodes represent transcription factors and the green nodes represent their target genes.</...

Hub-genes in the TF-miRNA co-regulatory network.

Yue Shi (128342)
Jihan Wang (577833)
Zhuoyuan Xin (4262548)
Zipeng Duan (577834)
Guoqing Wang (128352)
Fan Li (49953)

April 2015

Circles in the central line are genes that co-regulated by TFs and miRNAs, with red for up-regula...

Transcription factor (TF) families identified in our co-expression network are ranked based on number of differentially expressed members (fold-change ≥ |1.2| and p-value ≤ 0.05).

Sanchari Sircar (198485)
Nita Parekh (5066798)

May 2019

In (A) top 20 up-regulated TF families (‘red’ bars), and (B) top 20 down-regulated TF families (‘blu...

A visualized global gene regulatory network on the first dataset.

Jilong Li (664972)
Jie Hou (130874)
Lin Sun (105539)
Jordan Maximillian Wilkins (728446)
Yuan Lu (249915)
Chad E. Niederhuth (728447)
Benjamin Ryan Merideth (728448)
Thomas P. Mawhinney (500517)
Valeri V. Mossine (500515)
C. Michael Greenlief (664973)
John C. Walker (728449)
William R. Folk (527168)
Mark Hannink (46139)
Dennis B. Lubahn (527167)
James A. Birchler (257054)
Jianlin Cheng (45046)

April 2015

The network includes all the gene regulatory relationships between and within top 10 gene regulat...

Data Set 4: Transcription factors from the network based on statistically validated interactions likely dysfunctional due to SNPs provoking stop-codons gain or loss.

Alvaro Chiner-Oms (3751681)

February 2017

Transcription factors from the network based on statistically validated interactions likely dysfunct...

The transcriptional regulatory network for E. coli derived from the RegulonDB database.

Jeffrey D. Allen (189037)
Yang Xie (46489)
Min Chen (147733)
Luc Girard (67129)
Guanghua Xiao (46490)

January 2012

Each red dot is a gene, and a blue line between genes indicates a connection.</p

Regulatory network between TFs in “Neutrophils” under the “Clinically correlated set” in Table 6.

Y-h. Taguchi (3270852)
Shohei Komaki (3326091)
Yoichi Sutoh (513815)
Hideki Ohmomo (610855)
Yayoi Otsuka-Yamasaki (11833548)
Atsushi Shimizu (1862)

August 2023

Upper: Regnetwork web, lower: TTRUST2. Blue genes in Regnetwork web and yellow genes in TTRUST2 are ...

Regulatory network between TFs in “Neutrophils” under the “Clinically correlated set” in Table 4.

Y-h. Taguchi (3270852)
Shohei Komaki (3326091)
Yoichi Sutoh (513815)
Hideki Ohmomo (610855)
Yayoi Otsuka-Yamasaki (11833548)
Atsushi Shimizu (1862)

August 2023

Upper: Regnetwork web, lower: TTRUST2. Blue genes in Regnetwork web and yellow genes in TTRUST2 are ...

Regulatory network between TFs in “Neutrophils” under the “Max correlated set” in Table 4.

Y-h. Taguchi (3270852)
Shohei Komaki (3326091)
Yoichi Sutoh (513815)
Hideki Ohmomo (610855)
Yayoi Otsuka-Yamasaki (11833548)
Atsushi Shimizu (1862)

August 2023

Upper: Regnetwork web, lower: TTRUST2. Blue genes in Regnetwork web and yellow genes in TTRUST2 are ...

Regulatory network between TFs in “Monocytes” under the “Max correlated set” in Table 6.

Y-h. Taguchi (3270852)
Shohei Komaki (3326091)
Yoichi Sutoh (513815)
Hideki Ohmomo (610855)
Yayoi Otsuka-Yamasaki (11833548)
Atsushi Shimizu (1862)

August 2023

Upper: Regnetworkweb, lower: TTRUST2. Blue genes in Regnetworkweb and yellow genes in TTRUST2 are TF...

Regulatory network between TFs in “Monocytes” under the “Max correlated set” in Table 4.

Y-h. Taguchi (3270852)
Shohei Komaki (3326091)
Yoichi Sutoh (513815)
Hideki Ohmomo (610855)
Yayoi Otsuka-Yamasaki (11833548)
Atsushi Shimizu (1862)

August 2023

Upper: Regnetworkweb, lower: TTRUST2. Blue genes in Regnetworkweb and yellow genes in TTRUST2 are TF...

Regulatory network between TFs in “CD4 T cells” under the “Clinically correlated set” in Table 6.

Y-h. Taguchi (3270852)
Shohei Komaki (3326091)
Yoichi Sutoh (513815)
Hideki Ohmomo (610855)
Yayoi Otsuka-Yamasaki (11833548)
Atsushi Shimizu (1862)

August 2023

Upper: Regnetwork web, lower: TTRUST2. Blue genes in Regnetwork web and yellow genes in TTRUST2 are ...

Regulatory network between TFs in the “CD4 T cells category” under the “Max correlated set” in Table 6.

Y-h. Taguchi (3270852)
Shohei Komaki (3326091)
Yoichi Sutoh (513815)
Hideki Ohmomo (610855)
Yayoi Otsuka-Yamasaki (11833548)
Atsushi Shimizu (1862)

August 2023

Upper: Regnetwork web, lower: TTRUST2. Blue genes in Regnetwork web and yellow genes in TTRUST2 are ...

Regulatory network between TFs in the “CD4 T cells category” under the “Max correlated set” in Table 4.

Y-h. Taguchi (3270852)
Shohei Komaki (3326091)
Yoichi Sutoh (513815)
Hideki Ohmomo (610855)
Yayoi Otsuka-Yamasaki (11833548)
Atsushi Shimizu (1862)

August 2023

Upper: Regnetwork web, lower: TTRUST2. Blue genes in Regnetwork web and yellow genes in TTRUST2 are ...

Regulatory network between TFs in “CD4 T cells” under the “Clinically correlated set” in Table 4.

Y-h. Taguchi (3270852)
Shohei Komaki (3326091)
Yoichi Sutoh (513815)
Hideki Ohmomo (610855)
Yayoi Otsuka-Yamasaki (11833548)
Atsushi Shimizu (1862)

August 2023

Upper: Regnetworkweb, lower: TTRUST2. Blue genes in Regnetwork web and yellow genes in TTRUST2 are T...

The regulatory relationships between the top 5 TFs and their target genes.

Hongyu Diao (291310)
Xinxing Li (291312)
Sheng Hu (291314)
Yunhui Liu (133710)

February 2013

The red nodes represent transcription factors and the green nodes represent their target genes.</...

Hub-genes in the TF-miRNA co-regulatory network.

Yue Shi (128342)
Jihan Wang (577833)
Zhuoyuan Xin (4262548)
Zipeng Duan (577834)
Guoqing Wang (128352)
Fan Li (49953)

April 2015

Circles in the central line are genes that co-regulated by TFs and miRNAs, with red for up-regula...

Transcription factor (TF) families identified in our co-expression network are ranked based on number of differentially expressed members (fold-change ≥ |1.2| and p-value ≤ 0.05).

Sanchari Sircar (198485)
Nita Parekh (5066798)

May 2019

In (A) top 20 up-regulated TF families (‘red’ bars), and (B) top 20 down-regulated TF families (‘blu...

A visualized global gene regulatory network on the first dataset.

Jilong Li (664972)
Jie Hou (130874)
Lin Sun (105539)
Jordan Maximillian Wilkins (728446)
Yuan Lu (249915)
Chad E. Niederhuth (728447)
Benjamin Ryan Merideth (728448)
Thomas P. Mawhinney (500517)
Valeri V. Mossine (500515)
C. Michael Greenlief (664973)
John C. Walker (728449)
William R. Folk (527168)
Mark Hannink (46139)
Dennis B. Lubahn (527167)
James A. Birchler (257054)
Jianlin Cheng (45046)

April 2015

The network includes all the gene regulatory relationships between and within top 10 gene regulat...

Data Set 4: Transcription factors from the network based on statistically validated interactions likely dysfunctional due to SNPs provoking stop-codons gain or loss.

Alvaro Chiner-Oms (3751681)

February 2017

Transcription factors from the network based on statistically validated interactions likely dysfunct...

The transcriptional regulatory network for E. coli derived from the RegulonDB database.

Jeffrey D. Allen (189037)
Yang Xie (46489)
Min Chen (147733)
Luc Girard (67129)
Guanghua Xiao (46490)

January 2012

Each red dot is a gene, and a blue line between genes indicates a connection.</p

Regulatory network between TFs in “Neutrophils” under the “Max correlated set” in Table 6.

Abstract

Extracted data

Regulatory network between TFs in “Neutrophils” under the “Max correlated set” in Table 6.

Abstract

Extracted data

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